Changelog

List of changes in-between cellsino releases.

version 0.4.0

  • BREAKING CHANGE: revert previous breaking change, because this way the reconstruction with ODTbrain/radontea remains straight-forward
  • enh: support str in mode when computing sinograms

version 0.3.0

  • feat: new options for sinogram generation
    • measurement duration (or specific times per angle)
    • specify simulated imaging modalities
    • simulate photobleaching and background fluorescence
  • BREAKING CHANGE: changed definition of angles in sinogram generation

version 0.2.1

  • ref: migrate to flimage

version 0.2.0

  • feat: add option to roll rotational axis (in-plane) during sinogram generation
  • feat: add capability to track progress of sinogram generation
  • feat: add possibility to add (random) displacements for each sinogram slice
  • fix: medium index not stored in exported sinogram file

version 0.1.0

  • add basic example to docs
  • drawing refractive index and fluorescence phantoms
  • sinogram generation
  • basic functionalities (sphere element):
    • simple cell phantom
    • propagators: Rytov and projection
    • fluorescence projector

version 0.0.1

  • initial setup