Changelog

List of changes in-between cellsino releases.

version 0.5.0

• BREAKING CHANGE: switch from longdouble to double precision in propagator

• build: migrate from travisCI to GH Actions

• build: setup.py test is deprecated

• docs: refurbish docs

version 0.4.0

• BREAKING CHANGE: revert previous breaking change, because this way the reconstruction with ODTbrain/radontea remains straight-forward

• enh: support str in mode when computing sinograms

version 0.3.0

• feat: new options for sinogram generation

  • measurement duration (or specific times per angle)

  • specify simulated imaging modalities

  • simulate photobleaching and background fluorescence

• BREAKING CHANGE: changed definition of angles in sinogram generation

version 0.2.1

• ref: migrate to flimage

version 0.2.0

• feat: add option to roll rotational axis (in-plane) during sinogram generation

• feat: add capability to track progress of sinogram generation

• feat: add possibility to add (random) displacements for each sinogram slice

• fix: medium index not stored in exported sinogram file

version 0.1.0

• add basic example to docs

• drawing refractive index and fluorescence phantoms

• sinogram generation

• basic functionalities (sphere element):

  • simple cell phantom

  • propagators: Rytov and projection

  • fluorescence projector

version 0.0.1

• initial setup